Machine learning lab in life sciences (MALL)

 Research unit

General data

Coordinator Dr. Carlos Fernández Lozano
Profesor/a Titular de Universidade
Register date 08/03/2024
Dept. assignment Computer Science and Information Technologies
Center assignment Research Center on Information and Communication Technologies
Internal code E000827

Contact

Address Centro de Investigación en Tecnologías de la Información y las Comunicaciones Campus de Elviña s/n
Phone  881016013 ext. 6013
Email
Website  https://mall-lab.citic.udc.es

Research scope

Research lines

Integration of multiomic data: The research line of the group focuses on integrating omic data at different levels to understand molecular interactions and improve the diagnosis and treatment of diseases.

Discovery of omics biomarkers for drug response: The group investigates the discovery of omics biomarkers related to patient response to drugs, aiming to identify biological indicators that inform about the effectiveness and safety of treatments.

Keywords Genomics, transcriptomics, microbiome, biomarkers, bioinformatics, machine learning, data integration, dimensionality reduction, multiomic analysis, drug repurposing, cancer.

Technology offer

Services offered

Analysis of omic data using machine learning to discover patterns in complex diseases, identify biomarkers, and predict outcomes and drug responses, contributing to advancing knowledge and personalization in life sciences research.

Bioinformatics services and pipeline generation for management and modeling of RNA-seq, scRNA-seq, ChIP-seq, 16S rRNA, shotgun data. Analysis of differential expression and identification of genetic signatures associated with study conditions.

Whole Genome Sequencing (WGS) analysis services for humans, animals, plants, and microbial genomes, with data analysis at individual or population level.

Group members

Dr. Carlos Fernández Lozano
Computational Science and Artificial Intelligence
Coordinador/a
Dr. José Liñares Blanco
Contratado/a Postdoctoral
Diego Fernández Edreira
Computational Science and Artificial Intelligence
Doctorando/a
Paula Guijarro Sánchez
Doctorando/a
Falak Naz
Computational Science and Artificial Intelligence
Doctorando/a
Lucía Martínez Rodríguez
Computational Science and Artificial Intelligence
Contratado/a Proyecto

Research results

You can browse the catalog by selecting a merit type and year.

TALENTOS INCLUSIVOS - Jóvenes para una tecnología inclusiva: promoviendo soluciones tecnológicas con y para estudiantesde secundaria y personas con parálisis cerebral

Funding entity Fundación Española para la Ciencia y la Tecnología (FECYT)
Main researches PEREIRA LOUREIRO, JAVIER
Type Proyecto Otros Programas
Dates From 01/07/2024 to 30/06/2026

Antropología Forense guiada por Inteligencia Artificial (AFIA). (Proxecto Excelencia 2022)

Funding entity Consellería de Educación
Main researches Óscar Ibáñez Panizo
Type Proyecto Programas Autonomicos
Dates From 01/01/2022 to 20/11/2026

AXUDAS PARA A CONSOLIDACIÓN E ESTRUTURACIÓN DE UNIDADES DE INVESTIGACIÓN COMPETITIVAS.GRC 2022

Funding entity Consellería de Educación
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Autonomicos
Dates From 01/01/2022 to 20/11/2025

ANÁLISIS, VALIDACIÓN Y CONTRASTE DE LOS MODELOS DE SIMULACIÓN DISEÑADOS AD HOC CON DATOS ABIERTOS (OPEN DATA) Y LOS MODELOS PREDICTIVOS BASADOS EN DATOS REALES (SERGAS),

Funding entity Fundación Biomédica Galicia Sur
Main researches Carlos Fernández Lozano
Type Contrato
Dates From 20/09/2021 to 20/09/2022

Predicción Cooperativa

Funding entity CONFERENCIA DE RECTORES DE LAS UNIVERSIDADES ESPAÑOLAS (CRUE)
Main researches Ricardo Cao Abad
Type Proyecto Otros Programas
Dates From 01/10/2020 to 30/09/2021

AXUDAS PARA A CONSOLIDACIÓN E ESTRUTURACIÓN DE UNIDADES DE INVESTIGACIÓN COMPETITIVAS.GRC

Funding entity Consellería de Cultura, Educación e Ordenación Universitaria
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Autonomicos
Dates From 01/01/2019 to 20/11/2021

OBESITY AND DIABETES IN IBEROAMERICA: RISK FACTORS AND NEW PATHOGENIC AND PREDICTIVE BIOMARKERS

Funding entity MINISTERIO DE CIENCIA, INNOVACIÓN Y UNIVERSIDADES
Main researches Alejandro Pazos Sierra
Type Proyecto UE
Dates From 01/01/2019 to 31/12/2021

Proyecto Colaborativo de Integración de datos Genómicos (CICLOGEN). Técnicas de data mining y docking molecular para análisis de datos integrativos en cáncer de colon.

Funding entity Ministerio de Economía, Industria y Competitividad
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Nacionales
Dates From 01/01/2018 to 31/12/2020

OBESIDAD Y DIABETES: FACTORES DE RIESGO Y NUEVOS BIOMARCADORES PATOGÉNICOS Y PREDICTIVOS (IBEROBDIA)

Funding entity CYTED
Main researches Alberto Cepeda Saez
Type Proyecto Internacional
Dates From 01/01/2018 to 31/12/2020

Axudas para a consolidación e estruturación de unidades de investigación competitivas: Rede Galega de Investigación sobre Cancro Colorrectal (REGICC) .

Funding entity Consellería de Educación e Ordenación Universitaria
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Autonomicos
Dates From 25/10/2017 to 31/12/2019

Asesoramiento en la implantación de tecnologías de BigData y técnicas de Minería de Datos

Funding entity Fundación Novoa Santos
Main researches José Carlos Dafonte Vázquez / Francisco Javier Nóvoa de Manuel
Type Contrato
Dates From 04/07/2017 to 04/09/2017

ACORDO CONCRETO DE COLABORACIÓN ENTRE A ESCOLA DE ESPECIALIDADES ANTONIO DE ESCAÑO E A UDC PARA PROPORCIONARSE MUTUAMENTE CAPACIDADES DOCENTES

Funding entity MINISTERIO DE DEFENSA
Type Contrato
Dates From 01/01/2017 to 31/12/2020

Axudas para a acreditación, estruturación e mellora de centros de investigación singulares e agrupacións estratéxicas consolidadas do Sistema universitario de Galicia, cofinanciadas polo Fondo Europeo de Desenvolvemento Rexional (Feder), no marco do programa operativo Feder Galicia 2014-2020

Funding entity Consellería de Cultura, Educación e Ordenación Universitaria
Main researches Manuel F. González Penedo
Type Proyecto Programas Autonomicos
Dates From 01/01/2016 to 30/11/2019

Adaptación del software ARDEC-INTIC, de una Librería de AAGG de propósito general para la resolución de problemas y del motor de diseño asistido basado en Morfogénesis Genética aplicada sobre nubes de puntos desarrollados todos ellos por investigadores de la UDC, del grupo RNASA-IMEDIR, al sistema informático de la empresa CONSIGA PROJECTS S.L.

Funding entity CONSIGA PROJECTS S.L
Main researches Alejandro Pazos Sierra
Type Contrato
Dates From 30/12/2015 to 30/06/2016

Consolidacion y estructuración de unidades de investigación competitivas del Sistema universitario de Galicia.Grupo RNASA-IMEDIR

Funding entity Consellería de Cultura, Educación e Ordenación Universitaria
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Autonomicos
Dates From 17/10/2014 to 17/10/2017

Red Gallega de Investigacion sobre Cáncer Colorectal (REGICC)

Funding entity Consellería de Cultura, Educación e Ordenación Universitaria
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Autonomicos
Dates From 01/01/2014 to 31/12/2015

Proyecto Colaborativo en Informática Médica (CIMED). Innovación científico/técnica para la mejora de la asistencia y gestión de pacientes con seguimiento prolongado

Funding entity Ministerio de Economía y Competitividad (MINECO)
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Nacionales
Dates From 01/09/2013 to 01/09/2016

Plataforma HPC-PLUS para aplicaciones biomédicas

Funding entity Ministerio de Economía y Competitividad (MINECO)
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Nacionales
Dates From 01/01/2013 to 31/12/2015

Ayudas para la consolidación y estructuración de unidades de investigación competitiva. Modalidad de agrupaciones estratégicas (CITIC)

Funding entity Xunta de Galicia
Main researches Ricardo Cao Abad
Type Proyecto Programas Autonomicos
Dates From 01/01/2012 to 31/12/2013

Consolidacion y estructuración de unidades de investigación competitivas del Sistema universitario de Galicia.Grupo RNASA-IMEDIR

Funding entity Consellería de Cultura, Educación e Ordenación Universitaria
Main researches Alejandro Pazos Sierra
Type Proyecto Programas Autonomicos
Dates From 19/08/2011 to 18/08/2014

Desarrollo de un sistema de impresión DICOM de bajo coste utilizando impresoras convencionales

Funding entity M3M Europa, SL
Main researches Alejandro Pazos Sierra
Type Contrato
Dates From 07/11/2011 to 07/11/2013

Desenvolvemento de novas técnicas de análise de imaxes de xeles 2d para investigación biomédica

Funding entity Conselleria de Economia e Industria. Xunta de Galicia
Main researches Julián Alfonso Dorado De La Calle
Type Proyecto Programas Autonomicos
Dates From 14/12/2010 to 13/12/2013

Modelización del funcionamiento en términos cuantitativos y cualitativos de cuencas rurales y urbanas mediante técnicas de computación evolutiva

Funding entity Ministerio de Educación y Ciencia
Main researches Jerónimo Puertas Agudo
Type Proyecto Programas Nacionales
Dates From 01/10/2007 to 30/09/2010

Sistema celular artificial para procesado de información y crecimiento de estructuras

Funding entity Ministerio de Educación y Ciencia (MEC)
Main researches Julián Dorado De La Calle
Type Proyecto Programas Nacionales
Dates From 01/10/2006 to 30/09/2009

Sistema de prevención de intrusiones en redes wireless basadas en tecnología Wi-Fi. Asiento Registral: 03/2018/1399

Type Propiedad Intelectual
Entity Consellería de Cultura, Educación e Ordenación Universitaria
Authors Elena Botana de Castro, Adrian Carballal Mato, Carlos Fernández Lozano, Antonino Santos Del Riego
Application date 16/08/2018
Approval date 16/08/2018

Herramienta para el cálculo de métricas en imagen de corte histológico para la identificación de posibles daños valvulares inducidos por fármacos - VALVCALC

Type Software Registrado
Entity Universidade da Coruña
Authors Pazos, A., Dorado, J., M. Gestal, Cristian Robert Munteanu, Carlos Fernandez Lozano, Estefania Sande Castro, José Antonio Seoane Fernández, María Isabel Loza, José Manuel Brea Floriani, Norberto Ezquerra  , Ainhoa Gutiérrez Nieto, Alvarellos, A.
Application date 22/03/2017

Sistema de impresion DICOM de bajo coste utilizando impresoras convencionales

Type Software Registrado
Entity Universidade da Coruña (UDC)
Authors Alejandro Pazos Sierra, Julián Dorado de la Calle, Juan Ramón Rabuñal Dopico, Javier Pereira, Ana Belen Porto Pazos, Carlos Fernández Lozano, José Antonio Seoane Fernández, Alba Cabarcos Bermudez, Alberto Jose Alvarellos Gonzalez, Estefania Sande Castro
Application date 02/02/2012

Molecular Blockmatching method for gel image analysis

Type Patente
Entity Universidade da Coruña (UDC)
Authors Cristian Robert Munteanu, Alejandro Pazos Sierra, Julián Dorado de la Calle, F.J. Blanco García, Javier Pereira, Juan Ramón Rabuñal Dopico, Cristina Ruiz Romero, José Antonio Seoane Fernández, Ana María Freire Veiga, Enrique Fernández Blanco, Álvaro Rodríguez Tajes, Carlos Fernández Lozano, Ana Belen Porto Pazos
Application date 24/04/2012
Approval date 25/11/2014

Librería de AAGG de propósito general para la resolución de problemas

Type Software Registrado
Entity Universidade da Coruña (UDC)
Authors Vanessa Aguiar Pulido, Carlos Fernández Lozano, José Antonio Seoane Fernández, Daniel Rivero Cebrián, Marcos Gestal, Javier Pereira, Julián Dorado de la Calle, Juan Ramón Rabuñal Dopico, Alejandro Pazos Sierra
Application date 27/09/2011

Molecular Block-Matching Method for Gel Image Analysis

Type Patente
Entity Universidade da Coruña (UDC)
Authors Alejandro Pazos Sierra, Julián Dorado de la Calle, Francisco Blanco-Garcia, Juan Ramón Rabuñal Dopico, Cristina Ruiz Romero, José Antonio Seoane Fernández, Ana María Freire Vega, Alvaro Rodriguez Tajes, Carlos Fernández Lozano, Enrique Fernández Blanco, Javier Pereira, Cristian Munteanu, Ana Belén Porto Pazos
Application date 24/04/2011
Approval date 25/11/2014

MATEO: intermolecular alpha-amidoalkylation theoretical enantioselectivity optimization. Online tool for selection and design of chiral catalysts and products

Authors Paula Carracedo-Reboredo, Eider Aranzamendi, Shan He, Sonia Arrasate, Cristian R. Munteanu, Carlos Fernandez-Lozano, Nuria Sotomayor, Esther Lete, Humberto González-Díaz
Journal Journal of Cheminformatics Vol. 16 Num. 1
DOI https://doi.org/10.1186/s13321-024-00802-7

Microbiome preterm birth DREAM challenge: Crowdsourcing machine learning approaches to advance preterm birth research

Authors Jonathan L. Golob, Tomiko T. Oskotsky, Alice S. Tang, Alennie Roldan, Verena Chung, Connie W.Y. Ha, Ronald J. Wong, Kaitlin J. Flynn, Antonio Parraga-Leo, Camilla Wibrand, Samuel S. Minot, Boris Oskotsky, Gaia Andreoletti, Idit Kosti, Julie Bletz, Amber Nelson, Jifan Gao, Zhoujingpeng Wei, Guanhua Chen, Zheng-Zheng Tang, Pierfrancesco Novielli, Donato Romano, Ester Pantaleo, Nicola Amoroso, Alfonso Monaco, Mirco Vacca, Maria {De Angelis}, Roberto Bellotti, Sabina Tangaro, Abigail Kuntzleman, Isaac Bigcraft, Stephen Techtmann, Daehun Bae, Eunyoung Kim, Jongbum Jeon, Soobok Joe, Kevin R. Theis, Sherrianne Ng, Yun S. Lee, Patricia Diaz-Gimeno, Phillip R. Bennett, David A. MacIntyre, Gustavo Stolovitzky, Susan V. Lynch, Jake Albrecht, Nardhy Gomez-Lopez, Roberto Romero, David K. Stevenson, Nima Aghaeepour, Adi L. Tarca, James C. Costello, Marina Sirota
Journal Cell Reports Medicine (pages 101350 to 101350)
DOI https://doi.org/10.1016/j.xcrm.2023.101350

VIBES: a consensus subtyping of the vaginal microbiota reveals novel classification criteria

Authors D. Fernández-Edreira, J. Liñares-Blanco, P. V.-del-Río, C. Fernandez-Lozano
Journal Computational and Structural Biotechnology Journal Vol. 23 (pages 148 to 156)
DOI https://doi.org/10.1016/j.csbj.2023.11.050

Machine Learning based microbiome signature to predict Inflammatory Bowel Disease subtypes

Authors Jose Liñares-Blanco, Carlos Fernández Lozano, Seoane, J.-A., Guillermo H. Lopez Campos
Journal FRONTIERS IN MICROBIOLOGY (pages 1 to 11)
DOI https://doi.org/10.3389/fmicb.2022.872671

Wi-Fi Handshake: analysis of password patterns in Wi-Fi networks

Authors Adrian Carballal Mato, J. Pablo Galego-Carro, Nereida Rodriguez-Fernandez, Carlos Fernandez-Lozano
Journal PeerJ Computer Science (pages 1 to 25)
DOI https://doi.org/10.7717/peerj-cs.1185

Carbapenem Resistance in Acinetobacter nosocomialis and Acinetobacter junii Conferred by Acquisition of blaOXA-24/40 and Genetic Characterization of the Transmission Mechanism between Acinetobacter Genomic Species

Authors Cristina Lasarte-Monterrubio, Paula Guijarro-Sánchez, Alba Bellés, Juan Carlos Vázquez-Ucha, Jorge Arca-Suárez, Carlos Fernandez-Lozano, Germán Bou, Alejandro Beceiro
Journal Microbiology Spectrum Vol. 10 Num. 1 (pages 1 to 7)

A review on machine learning approaches and trends in drug discovery. IF 7.271. Q1

Authors Paula Carracedo-Reboredo, Jose Liñares-Blanco, Nereida Rodriguez-Fernandez, Francisco Cedron, Francisco Javier Nóvoa De Manuel, Adrian Carballal Mato, Victor Maojo, Alejandro Pazos, Carlos Fernández Lozano
Journal Computational and Structural Biotechnology Journal Vol. 19 (pages 4538 to 4558)

Random forest-based prediction of stroke outcome

Authors Carlos Fernandez-Lozano, Pablo Hervella, Virginia Mato Abad, Manuel Rodríguez-Yáñez, Sonia María Suárez Garaboa, Iria López-Dequidt, Ana Estany-Gestal, Tomás Sobrino, Francisco Campos, José Castillo, Santiago Rodríguez-Yáñez, Ramón Iglesias-Rey
Journal SCIENTIFIC REPORTS Vol. 11 Num. 10071 (pages 1 to 12)

Machine Learning analysis of the human infant gut microbiome identifies influential species in type 1 diabetes

Authors Diego Fernández-Edreira, Jose Liñares-Blanco, Carlos Fernández Lozano
Journal Expert Systems with Applications Vol. 185 Num. 115648 (pages 1 to 11)
DOI https://doi.org/10.1016/j.eswa.2021.115648

Machine learning analysis of TCGA cancer data

Authors Jose Liñares-Blanco, Alejandro Pazos, Carlos Fernández Lozano
Journal PeerJ Computer Science Num. 7:e584 (pages 1 to 47)
DOI https://doi.org/10.7717/peerj-cs.584

MCDCalc: Markov Chain Molecular Descriptors Calculator for Medicinal Chemistry [Q2, IF=3,442]

Authors Paula Carracedo-Reboredo, Ramiro Corona, Mikel Martinez-Nunes, Carlos Fernández Lozano, Georgia Tsiliki, Haralambos Sarimveis, Eider Aranzamendi, Arrasate, Sonia, Sotomayor, Nuria, Lete, Esther, C. R. Munteanu, Humbert González-Díaz
Journal CURRENT TOPICS IN MEDICINAL CHEMISTRY Vol. 20 (pages 1 to 13)
DOI https://doi.org/10.2174/1568026620666191226092431

Population Subset Selection for the Use of a Validation Dataset for Overfitting Control in Genetic Programming (Q3 - JCR: 2.039)

Authors Daniel Rivero Cebrián, Enrique Fernández Blanco, Carlos Fernández Lozano, Alejandro Pazos Sierra
Journal JOURNAL OF EXPERIMENTAL & THEORETICAL ARTIFICIAL INTELLIGENCE Vol. 32 Num. 2 (pages 243 to 271)
DOI https://doi.org/10.1080/0952813x.2019.1647562

Covid-19 projections for Spain using forecast combinations

Authors José A. Vilar, R. Fernández-Casal, Carlos Fernández Lozano
Journal Boletín de Estadística e Investigación Operativa Vol. 36 Num. 2 (pages 99 to 125)

Comparison of Outlier-Tolerant Models for Measuring Visual Complexity

Authors Adrian Carballal Mato, Carlos Fernández Lozano, Nereida Rodriguez-Fernandez, Iria Santos, Juan Jesús Romero Cardalda
Journal Entropy Vol. 22 Num. 4 (pages 1 to 114)
DOI https://doi.org/10.3390/e22040488

Molecular docking and machine learning analysis of Abemaciclib in colon cancer

Authors Jose Liñares-Blanco, C. R. Munteanu, Pazos, A., Fernandez-Lozano, C.
Journal BMC MOLECULAR AND CELL BIOLOGY Vol. 21 Num. 52 (pages 1 to 18)
DOI https://doi.org/10.1186/s12860-020-00295-w

Identification of predictive factors of the degree of adherence to the mediterranean diet through machine-learning techniques

Authors Alba Arceo-Vilas, Carlos Fernandez-Lozano, Salvador Pita, Sonia Pértega-Díaz, Pazos, A.
Journal PeerJ Computer Science Vol. 6:e287 (pages 1 to 18)
DOI https://doi.org/10.7717/peerj-cs.287

Automated Neuron Detection in High-Content Fluorescence Microscopy Images Using Machine Learning. IF: 3.852 (Q1)

Authors Gadea Mata, Miroslav Radojevic, Carlos Fernández Lozano, Igor Smal, N. Werij, Miquel Morales, Erik Meijering, Julio Rubio
Journal Neuroinformatics Vol. 17 Num. 2 (pages 253 to 269)

Transfer learning features for predicting aesthetics through a novel hybrid machine learning method. IF 4.215 (Q1)

Authors Adrian Carballal Mato, Carlos Fernández Lozano, Jonathan Heras, Juan Jesús Romero Cardalda
Journal NEURAL COMPUTING & APPLICATIONS (pages 1 to 12)

Machine learning applied to transcriptomic data to identify genes associated with feed efficiency in pigs. IF: 3.743 (Q1-P2)

Authors Miriam Piles, Carlos Fernández Lozano, María Velasco-Galilea, Olga González-Rodríguez, Juan Pablo Sánchez, David Tarrallardona, María Ballester, Raquel Quintanilla
Journal GENETICS SELECTION EVOLUTION (PARIS) Vol. 51 Num. 10 (pages 1 to 15)

Community assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen

Authors Michael P Menden, Dennis Wang, Mike J. Mason, Bence Szalai, Krishna C. Bulusu, Yuanfang Guan, Thomas Yu, Jaewoo Kang, Minji Jeon, Russ Wolfinger, Tin Nguyen, Mikhail Zaslavskiy, AstraZeneca-Sanger Drug Combination DREAM Consortium, In Sock Jang, Zara Ghazoui, Mehmet Eren Ahsen, Robert Vogel, Elias Chaibub Neto, Thea Norman, Eric K. Y. Tang, Mathew J. Garnett, Giovanni Y. Di Veroli, Stephen Fawell, Gustavo Stolovitzky, Justin Guinney, Jonathan R. Dry, Julio Saez-Rodriguez
Journal NATURE COMMUNICATIONS Vol. 10:2674 (pages 1 to 17)
DOI https://doi.org/10.1038/s41467-019-09799-2

Visual complexity modelling based on image features fusion of multiple kernels

Authors Carlos Fernández Lozano, Adrian Carballal Mato, Penousal Machado, Antonino Santos Del Riego, Juan Jesús Romero Cardalda
Journal PEERJ (pages 1 to 28)
DOI https://doi.org/10.7717/peerj.7075

Avoiding the Inherent Limitations in Datasets Used for Measuring Aesthetics When Using a Machine Learning Approach

Authors Adrian Carballal Mato, Carlos Fernández Lozano, Nereida Rodriguez-Fernandez, Luz Castro Pena, Antonino Santos Del Riego
Journal COMPLEXITY Vol. 2019 (pages 1 to 12)

Automatic multiscale vascular image segmentation algorithm for Coronary Angiography IF:2,783 Q2

Authors Adrian Carballal Mato, Francisco Javier Nóvoa De Manuel, Carlos Fernández Lozano, GARCIA-GUIMARAES, MM, Guillermo Aldama Lopez, Calviño R, Jose Manuel Vazquez Rodriguez, Alejandro Pazos Sierra
Journal Biomedical Signal Processing and Control

Prediction of high anti-angiogenic activity peptides in silico using a generalized linear model and feature selection. IF: 4.122 (Q1)

Authors José Liñares-Blanco, Porto-Pazos A. B., Pazos, A., Fernandez-Lozano, C.
Journal SCIENTIFIC REPORTS Vol. 8 Num. 15688 (pages 1 to 11)
DOI https://doi.org/10.1038/s41598-018-33911-z

Authentication of tequilas using pattern recognition and supervised Classification

Authors Pérez-Caballero, L., Andrade, J. M., Olmos, P., Molina, Y., Jiménez, I., Durán, J.J., Fernandez-Lozano, C., Miguel-Cruz, F.
Journal TRAC-TRENDS IN ANALYTICAL CHEMISTRY (pages 117 to 129)
DOI https://doi.org/10.1016/j.trac.2017.07.008

A semantic interoperability approach to support integration of gene expression and clinical data in breast cancer. IF: 2.755 (Q2)

Authors Raul Alonso-Calvo, Sergio Paraiso-Medina, Perez-Rey, David, Enrique Alonso-Oset, Ruud van Stiphout, Sheng Yu, Marian Taylor, Francesca Buffa, Francesca Buffa, Fernandez-Lozano, Carlos, Alejandro Pazos Sierra, Victor Maojo
Journal COMPUTERS IN BIOLOGY AND MEDICINE

Experimental study and ANN dual-time scale perturbation model of electrokinetic properties of microbiota (IF: 4,076; Q1)

Authors Yong Liu, Cristian R. Munteanu, Carlos Fernandez Lozano, Alejandro Pazos Sierra, Tao Ran, Zhiliang Tan, Yizun Yu, Chuanshe Zhou, Shaoxun Tang, Gonzalez-Diaz, Humberto
Journal FRONTIERS IN MICROBIOLOGY Vol. 8 (pages 1216 to 1216)
DOI https://doi.org/10.3389/fmicb.2017.01216

Experimental study and Random Forest prediction model of microbiome cell surface hydrophobicity. IF: 2.981 (Q1)

Authors Yong Liu, Shaoxun Tang, Carlos Fernández Lozano, C. Munteanu, Alejandro Pazos Sierra, Yi-zun yu, Zhiliang Tan, Humberto González Díaz
Journal Expert Systems with Applications Vol. 72 (pages 306 to 316)

Using Genetic Algorithms to improve Support Vector Regression in the analysis of Atomic spectra of Lubricant Oils IF:1.495

Authors Carlos Fernández Lozano, Francisco Abel Cedrón Santaeufemia, Daniel Rivero Cebrián, Julián Dorado de la Calle, José Manuel Andrade Garda, Alejandro Pazos Sierra, Marcos Gestal Pose
Journal ENGINEERING COMPUTATIONS Vol. 33 Num. 4 (pages 995 to 1005)
DOI https://doi.org/10.1108/ec-03-2015-0062

A methodology for the design of experiments in computational intelligence with multiple regression models. IF: 2.183 (Q1)

Authors Carlos Fernandez Lozano, Marcos Gestal Pose, Cristian R. Munteanu, Julián Dorado de la Calle, Alejandro Pazos Sierra
Journal PEERJ Vol. 4:e2721 (pages 1 to 22)

Texture analysis in gel electrophoresis images using an integrative kernel-based approach. (Q1) IF: 5.578

Authors Carlos Fernández Lozano, José Antonio Seoane Fernández, Marcos Gestal, Tom R. Gaunt, Alejandro Pazos Sierra, Colin Campbell, Julián Dorado
Journal SCIENTIFIC REPORTS Vol. 6 Num. Art. 9256 (pages 1 to 13)

Texture classification using feature selection and kernel based techniques (IF: 1.304, Q2)

Authors Fernandez-Lozano, C., J. Seoane, Marcos Gestal, T. R. Gaunt, J. Dorado, C. Campbell
Journal Soft Computing Vol. 19 Num. 9 (pages 2469 to 2480)
DOI https://doi.org/10.1007/s00500-014-1573-5

RRegrs: An R package for Computer-aided Model Selection with Multiple Regression Models (Q1) IF: 4.547

Authors Georgia Tsiliki, Cristian R. Munteanu, Antonio Seoane, Carlos Fernández Lozano, Haralambos Sarimveis, Egon Willighagen
Journal Journal of Cheminformatics Vol. 7 (pages 46 to 62)
DOI https://doi.org/10.1186/s13321-015-0094-2

Classification of signaling proteins based on molecular star graph descriptors using machine-learning models - IF: 2.049 (Q1)

Authors Carlos Fernández Lozano, Ruben F. Cuiña, José Antonio Seoane Fernández, Enrique Fernandez-Blanco, Julián Dorado de la Calle, Cristian R. Munteanu
Journal JOURNAL OF THEORETICAL BIOLOGY Vol. 384 (pages 50 to 58)
DOI https://doi.org/10.1016/j.jtbi.2015.07.038

A Hybrid Evolutionary System for Automated Artificial Neural Networks Generation and Simplification in Biomedical Applications - IF: 0.770 (Q4)

Authors Enrique Fernandez-Blanco, Daniel Rivero Cebrián, Marcos Gestal, Carlos Fernández Lozano, Norberto Ezquerra, Cristian R. Munteanu, Julián Dorado
Journal CURRENT BIOINFORMATICS Vol. 10 Num. 5 (pages 672 to 691)
DOI https://doi.org/10.2174/1574893610666151008012923

Solvent Accessible Surface Area-Based Hot-Spot Detection Methods for Protein-Protein and Protein-Nucleic Acid Interfaces (Q1, IF: 3.738)

Authors Cristian R. Munteanu, Antonio Cesar Pimenta, Carlos Fernández Lozano, André Melo, M. Natália D. S. Cordeiro, Irina Sousa Moreira
Journal JOURNAL OF CHEMICAL INFORMATION AND MODELING Vol. 55 Num. 5 (pages 1077 to 1086)
DOI https://doi.org/10.1021/ci500760m

Classification of mild cognitive impairment and Alzheimer¿s disease with machine-learning techniques using 1H Magnetic Resonance Spectroscopy data (Q1, IF: 2.240)

Authors Cristian R. Munteanu, Carlos Fernández Lozano, Virginia Mato Abad, Salvador Pita, Juan Álvarez-Linera, Juan Antonio Hernández Tamames, Alejandro Pazos Sierra
Journal Expert Systems with Applications Vol. 42 (pages 6205 to 6214)
DOI https://doi.org/10.1016/j.eswa.2015.03.011

Improving Enzyme Regulatory Protein Classification by means of SVM-RFE Feature Selection - IF: 3.183 (Q2)

Authors Carlos Fernández Lozano, Enrique Fernández Blanco, Kirtan Dave, Mª de las Nieves Pedreira Souto, Marcos Gestal, Julián Dorado de la Calle, Cristian Robert Munteanu
Journal MOLECULAR BIOSYSTEMS Vol. 10 (pages 1063 to 1071)

Two-dimensional gel electrophoresis image registration using block-matching techniques and deformation models. IF: 2.305 (Q2)

Authors Rodriguez, Alvaro, Fernandez-Lozano, Carlos, Julián Dorado de la Calle, Rabunal, Juan R.
Journal Analytical Biochemistry Vol. 454 (pages 53 to 59)
DOI https://doi.org/10.1016/j.ab.2014.02.027

Texture Classification of Proteins using Support Vector Machines and Bio-Inspired Metaheuristics

Authors Carlos Fernández Lozano, Pablo Mesejo Santiago, José Antonio Seoane Fernández, Youssef Nashed, Stefano Cagnoni, Julián Dorado
Journal COMMUNICATIONS IN COMPUTER AND INFORMATION SCIENCE Vol. 452 (pages 1 to 14)
DOI https://doi.org/10.1007/978-3-662-44485-6_9

Markov Mean Properties for Cell Death-Related Protein Classification. IF: 2.303 (Q1)

Authors C. Fernández, M. Gestal, H. González-Díaz, J. Dorado, A. Pazos, Cristian Robert Munteanu
Journal JOURNAL OF THEORETICAL BIOLOGY Num. 21 (pages 0 to 12)
DOI https://doi.org/10.1016/j.jtbi.2014.01.033

Genetic Based Spot Detection Method in Two-Dimensional Electrophoresis Images

Authors Carlos Fernandez, Seoane, Jose A., Daniel Rivero Cebrián, Julián Dorado
Journal International Journal Information Technologies & Knowledge Vol. 7 Num. 1 (pages 72 to 82)

Kernel-based Feature Selection Techniques for Transport Proteins Based on Star Graph Topological Indices -- IF: 3.453 (Q1)

Authors Fernandez-Lozano, Carlos, Marcos Gestal, Mª de las Nieves Pedreira Souto, Lucian Postelnicu, Julián Dorado de la Calle, Cristian Robert Munteanu
Journal CURRENT TOPICS IN MEDICINAL CHEMISTRY Vol. 13 Num. 14 (pages 1681 to 1691)
DOI https://doi.org/10.2174/15680266113139990119

High Order Texture-Based Analysis in Biomedical Images. IF: 1.059 (Q4)

Authors Fernandez-Lozano, Carlos, Marcos Gestal, Mª de las Nieves Pedreira Souto, Julián Dorado de la Calle, Alejandro Pazos Sierra
Journal CURRENT MEDICAL IMAGING REVIEWS Vol. 9 Num. 4 (pages 309 to 317)

Hybrid model based on genetic algorithms and SVM applied to variable selection within fruit juice classification. IF: 1.219 (Q2)

Authors Carlos Fernández Lozano, C. Canto, Marcos Gestal Pose, J.M. Andrade, Juan Ramón Rabuñal Dopico, Julián Dorado de la Calle, Alejandro Pazos Sierra
Journal The Scientificworld Journal Vol. 2013 (pages 1 to 13)
DOI https://doi.org/10.1155/2013/982438

Applied Computational Techniques on Schizophrenia using genetic mutations. IF: 3.453 (Q1)

Authors Vanessa Aguiar Pulido, Marcos Gestal, Carlos Fernández Lozano, Daniel Rivero Cebrián, Cristian Robert Munteanu
Journal CURRENT TOPICS IN MEDICINAL CHEMISTRY Vol. 13 Num. 5 (pages 675 to 684)
DOI https://doi.org/10.2174/1568026611313050010

Spot matching in 2D electrophoresis experiments. SJR: 0.157

Authors Carlos Fernández Lozano, Álvaro Rodríguez Tajes, Cristina Ruiz Romero, José Antonio Seoane Fernández
Journal INTERNATIONAL JOURNAL OF DATA ANALYSIS TECHNIQUES AND STRATEGIES. Vol 5, Num 2 - Special Issue on Data Mining in Biomedicine Vol. 5 Num. 2 (pages 198 to 213)
DOI https://doi.org/10.1504/ijdats.2013.053681

Statistical Inference from High Dimensional Data

Editors Carlos Fernández Lozano
Publishing MDPI, Basel (Suiza)
ISBN 978-3-0365-0945-7

Non-rigid motion estimation using Block-Matching Techniques

Authors Alvaro Rodriguez Tajes, Carlos Fernández Lozano, Juan Ramón Rabuñal Dopico
Editors Juan Ramón Rabuñal Dopico
Publishing Lambert Academic Publishing GmbH & Co. KG, Saarbrücken (Alemania)
ISBN 978-3-659-13941-3

Differential Gene Expression Analysis of RNA-seq Data Using Machine Learning for Cancer Research

Authors J. Liñares,Marcos Gestal,Julián Dorado,Carlos Fernández Lozano
Book Machine Learning Paradigms. Applications of Learning and Analytics in Intelligent Systems
Vol. 1 Publishing: Springer.
ISBN: 978-3-030-15627-5
Pages From 27 to 66

Multivariate Classification Techniques to Authenticate Mexican Commercial Spirits

Authors Carlos Fernández Lozano,M. Gestal,G. Pérez Caballero,A.L. Revilla-Vázquez,José M. Andrade
Book Quality Control in the Beverage Industry
Vol. 17 Publishing: Elsevier.
ISBN: 978-0-12-816681-9
Pages From 259 to 288

Aesthetic Composition Indicator Based on Image Complexity

Authors Adrian Carballal Mato,Luz Castro Pena,Carlos Fernández Lozano,Nereida Rodriguez-Fernandez,Juan Jesús Romero Cardalda,Penousal Machado
Book Interface Support for Creativity, Productivity, and Expression in Computer Graphics
Publishing: IGI-Global.
ISBN: 1522573712
Pages From 110 to 110

Machine Learning in Biomedical Informatics

Authors Carlos Fernández Lozano,Adrian Carballal Mato,C. R. Munteanu,Gestal, M.,Victor Maojo,Alejandro Pazos Sierra
Book Reference Module in Biomedical Sciences
Publishing: Elsevier.
ISBN: 978-0-12-801238-3
Pages From 1 to 1

La proteomica en el estudio del cancer colorrectal y otros tipos de tumores

Authors Ana María Freire Veiga,José Antonio Seoane Fernández,Carlos Fernández Lozano,Cristina Ruiz Romero,Julián Dorado de la Calle,Alejandro Pazos Sierra
Book Tecnologías NBIC en Salud. El papel protagonista de la nanociencia. Aplicación de especial interés al cáncer colorrectal
Publishing: Ciencia y Tecnología para el Desarrollo CYTED.
ISBN: 978-84-15413-15-8
Pages From 81 to 94

Introducción al análisis de datos biomédicos con técnicas de aprendizaje máquina

Authors José Antonio Seoane Fernández,Carlos Fernández Lozano,Julián Dorado
Book Advances in biomedical informatics: COMBIOMED
Publishing: Fundación de la Universidad de A Coruña.
ISBN: 978-84-9749-477-9
Pages From 125 to 143

Modelos bioinformáticos para la predicción de compuestos biológicamente activos en cáncer de colon

Author Paula Carracedo Reboredo
Director/s Sonia Arrasate Gil; Carlos Fernández Lozano
Scope Facultad de Informática
Qualification Sobresaliente Cum Laude

Técnicas de machine learning aplicadas al diagnóstico y tratamiento oncológico de precisión mediante el análisis de datos ómicos

Author José Liñares Blanco
Director/s Carlos Fernández Lozano; José Antonio Seoane Fernández
Scope Facultad de Informática
Qualification Sobresaliente Cum Laude

A influencia de facer os criterios de avaliación públicos en materias vinculadas ao Grao de Enxeñaría en Informática
VI Xornadas de Innovación Docente da Universidade da Coruña
Local

Authors Enrique Fernández-Blanco, Carlos Fernandez-Lozano, Daniel Rivero Cebrián
Organization Universidade da Coruña
Place Coruña, A (España)
DOI https://doi.org/10.17979/spudc.000016.049

Automatic issue generation
V XoveTIC Conference. XoveTIC 2022
National

Authors Francisco Cedron, Michael Añon-Valera, Sara Alvarez-Gonzalez, Carlos Fernandez-Lozano, Adrian Carballal Mato
Organization Universidade da Coruña
Place Coruña, A (España)
DOI https://doi.org/10.29007/61ns

A gene expression signature of 37 genes improves survival prognosis in colon cancer patients
American Association for Cancer Research
International

Authors Jose Liñares-Blanco, Carlos Fernandez-Lozano, José Antonio Seoane Fernández
Place Philadelphia (Estados Unidos)
DOI https://doi.org/10.1158/1538-7445.am2021-763

Machine Learning Algorithms Reveals Country-Specific Metagenomic Taxa from American Gut Project Data
Medical Informatics Europe 2021
International

Authors Jose Liñares-Blanco, Carlos Fernandez-Lozano, Seoane, J.-A., Guillermo H. Lopez Campos
Organization European Federation for Medical Informatics
Place Marseille (Francia)
DOI https://doi.org/10.3233/shti210185

MACHINE LEARNING PARA LA IDENTIFICACIÓN DE FACTORES PREDICTIVOS DEL GRADO DE ADHERENCIA A LA DM
XXII Congreso Nacional de Informática de la Salud (Inforsalud 2019)
National

Authors Alba Arceo-Vilas, Carlos Fernández Lozano, Sonia Pértega Díaz, Alejandro Pazos Sierra, Sara Alvarez-Gonzalez
Organization Sociedad Española de Informática de la Salud (SEIS)
Place Madrid (España)

Gene signatures research involved in cancer using machine learning
XoveTIC 2019
International

Authors José Liñares-Blanco, Carlos Fernández Lozano
Organization Centro de Investigación en Tecnoloxías da Información e as Comunicacións (CITIC)
Place Coruña, A (España)

Prediction of Peptide Vascularization Inhibitory Activity in Tumor Tissue as a Possible Target for Cancer Treatment
XoveTIC 2019
International

Authors José Liñares-Blanco, Carlos Fernández Lozano
Organization Centro de Investigación en Tecnoloxías da Información e as Comunicacións (CITIC)
Place Coruña, A (España)

Integrative Multi-Omics Data-Driven approach for metastasis prediction in cancer. (Best paper award). Article No. 44
DATA '18 Proceedings of the First International Conference on Data Science, E-learning and Information Systems
International

Authors Carlos Fernández Lozano, José Liñares-Blanco, Marcos Gestal, Julián Dorado, Alejandro Pazos Sierra
Organization ACM
Place Madrid (España)

Redesign and performance of an automatic segmentation method
MOL2NET 2018, International Conference on Multidisciplinary Sciences, 4th edition
International

Authors Adrian Carballal Mato, Carlos Fernández Lozano, Francisco Javier Nóvoa De Manuel, Nereida Rodriguez-Fernandez, Iria Santos, GARCIA-GUIMARAES, MM, Guillermo Aldama, Calviño-Santos R, Vázquez-Rodríguez JM, Alejandro Pazos Sierra
Place Bilbao (España)
DOI https://doi.org/10.3390/mol2net-04-05501

Mejora continua de la calidad de la docencia a partir del análisis de los resultados de evaluación
Actas XXIV Jornadas sobre la Enseñanza Universitaria de la Informática (JENUI 2018)
National

Authors Marcos Gestal, Carlos Fernández Lozano, Cristian Robert Munteanu, Juan Ramón Rabuñal Dopico, Julián Dorado
Place Barcelona (España)

Analysis of Chronic Kidney Disease Data in Peritoneal Dialysis Patients (PD) using Artificial Intelligence Techniques
17 Congress of the International Society of Peritoneal Dialysis 2018
International

Authors Alejandro Pazos Sierra, Carlos Fernández Lozano, Manuel Fidalgo Díaz, Iyad Abuward Abu-Sharkh, Cándido Díaz Rodríguez, Rafael Alonso Valente
Place Vancouver (Canadá)

Machine Learning transcriptome analysis to identify genes associated with feed efficiency in pigs.
69th Annual Meeting of the European Federation of Animal Science
International

Authors Miriam Piles, Carlos Fernández Lozano, M. Velasco, O. González, J.P. Sanchez, R. Quintanilla, M. Ballester
Organization European federation of Animal Science (EAAP)
Place Dubrovnik (Croacia)
DOI https://doi.org/10.3920/978-90-8686-871-1

Evaluation as a continuous improvement process in the learning of programming languages
International Joint Conference SOCO 18-CISIS 18-ICEUTE 18
International

Authors Marcos Gestal, Carlos Fernández Lozano, C. R. Munteanu, Juan Rabuñal, Julián Dorado
Organization Universidad del País Vasco
Place Donostia-San Sebastián (España)

A generalized linear model for cardiovascular complications prediction in PD patients. Article N0. 43
DATA '18 Proceedings of the First International Conference on Data Science, E-learning and Information Systems
International

Authors Fernandez-Lozano, C., Rafael Alonso Valente, Manuel Fidalgo Díaz, Alejandro Pazos Sierra
Organization ACM
Place Madrid (España)

Infraestructure to support biomedical applications
MOL2NET 2018, International Conference on Multidisciplinary Sciences, 4th edition
International

Authors Francisco Cedron, Adrian Carballal Mato, Carlos Fernández Lozano, C. R. Munteanu, Alejandro Pazos Sierra
Place Bilbao (España)
DOI https://doi.org/10.3390/mol2net-04-05507

HPC-PLUS platform for biomedical applications
VIII Spanish Drug Discovery Network Meeting
International

Authors Francisco Cedron-Santaeufemia, Enrique Fernandez-Blanco, Carlos Fernandez Lozano, Cristian R. Munteanu, Alejandro Pazos Sierra
Organization SLAS Meeting
Place Santiago de Compostela (España)

Análisis actual de datos desde la metagenómica a la integración de datos ómicos
Sesión impartida en el Complejo hospitalario universitario Juan Canalejo (A Coruña)
National

Authors Carlos Fernandez Lozano
Organization Complejo hospitalario universitario Juan Canalejo (A Coruña)
Place Coruña, A (España)

Using the RRegrs R package for automating predictive modelling
MOL2NET, International Conference on Multidisciplinary Sciences
International

Authors Georgia Tsiliki, Cristian R. Munteanu, Seoane, Jose A., Carlos Fernandez Lozano, Haralambos Sarimveis, Egon Willighagen
Place Bilbao (España)
DOI https://doi.org/10.3390/mol2net-1-f009

Solvent Accessible Surface Area Hot-Spot Detection Method
MOL2NET, International Conference on Multidisciplinary Sciences, 25 December 2016¿25 January 2017
International

Authors Cristian R. Munteanu, António Pimenta, Carlos Fernandez Lozano, André Melo, M. Natália D. S. Cordeiro, Irina Sousa Moreira
Place Bilbao (España)
DOI https://doi.org/10.3390/mol2net-1-f012

AlzPred-SVV: Free Web Tool for Alzheimer Prediction using Spectroscopy Voxel Volume
MOL2NET, International Conference on Multidisciplinary Sciences
International

Authors Virginia Mato Abad, Cristian Munteanu, Carlos Fernández Lozano, Alejandro Pazos Sierra
Place Bilbao (España)
DOI https://doi.org/10.3390/mol2net-1-f007

A Texture-Based Classification Method for Proteins in Two-Dimensional Electrophoresis Gel Images. CORE C
International Conference on Computer Vision Theory and Applications. VISSAP 2013
International

Authors Carlos Fernandez Lozano, José Antonio Seoane Fernández, Marcos Gestal, Daniel Rivero Cebrián, Julián Dorado, Alejandro Pazos Sierra
Organization INSTICC
Place Barcelona (España)

Anonymizing patient genomic data for public sharing association studies. CORE B
MedInfo 2013
International

Authors Carlos Fernández Lozano, Guillermo H. Lopez Campos, José Antonio Seoane Fernández, Victoria Lopez Alonso, Julián Dorado de la Calle, Fernando Martín Sánchez, Alejandro Pazos Sierra
Organization IMIA
Place Copenhague (Dinamarca)

Texture Classification using Kernel-Based Techniques -- CORE B
International Work Conference on Artificial Neural Network (IWANN 2013)
International

Authors Carlos Fernández Lozano, José Antonio Seoane Fernández, Marcos Gestal, Tom R. Gaunt, Colin Campbell
Organization Iwann
Place Puerto de la Cruz (España)

2D-PAGE Texture classification using support vector machines and genetic algorithms. An hybrid approach for texture image analysis
6th International Joint Conference on Biomedical Engineering Systems and Technologies
International

Authors Carlos Fernández Lozano, José Antonio Seoane Fernández, Pablo Mesejo Santiago, Youssef Nashed, Stefano Cagnoni, Julián Dorado
Place Barcelona (España)

Identificación de proteínas en imágenes de geles 2D utilizando DoG y algoritmos genéticos
MAEB 2012 - VIII Congreso Español sobre metaheurísticas, algoritmos evolutivos y bioinspirados
National

Authors Carlos Fernández Lozano, José Antonio Seoane Fernández, Alberto Alvarellos González, Julián Dorado de la Calle
Organization UNIVERSIDAD DE CASTILLA-LA MANCHA
Place Albacete (España)

Analysis of Deformation Processes Using Block-Matching Techniques. CORE C
VISAPP 2012, International Conference on Computer Vision Theory and Applications
International

Authors Rodriguez, A., Fernandez-Lozano, C., Seoane, J.-A., Rabuñal, J., Dorado, J.
Place Roma (Italia)

Motion Estimation in Real Deformation Processes Based on Block-Matching Techniques
ISSPIT 2011, IEEE International Symposium on Signal Processing and Information Technology
International

Authors Rodriguez, A., Fernandez-Lozano, C., Seoane, J.-A., Rabuñal, J., Dorado, J.
Organization IEEE Computer Society
Place Bilbao (España)